BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D06SP1|AL430533
(567 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1659 886 0.0
>3x_Contig1659
Length = 17570
Score = 886 bits (445), Expect = 0.0
Identities = 451/455 (99%)
Strand = Plus / Plus
Query: 113 aaatgaccgtacaaaatcttttctgcgtatgtcaatggacgtcctagtctttctctgacg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 aaatgaccgtacaaaatcttttctgcgtatgtcaatggacgtcctagtctttctctgacg 2416
Query: 173 atattgacatactcaatgttttgtttatagttaatgaaggaatggtcttccaacaaattt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 atattgacatactcaatgttttgtttatagttaatgaaggaatggtcttccaacaaattt 2476
Query: 233 tgatgaactttagagtctctagtcatagtactagagactccggtagccaagtgtctgatg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 tgatgaactttagagtctctagtcatagtactagagactccggtagccaagtgtctgatg 2536
Query: 293 actccttgtctaacgactccttgcttcttcaaggcaacacgagcagacaacattatctca 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 actccttgtctaacgactccttgcttcttcaaggcaacacgagcagacaacattatctca 2596
Query: 353 gtgcagtttaagcggggtttaatccttgatagatgtaatactattaammactgaaaataa 412
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2597 gtgcagtttaagcggggtttaatccttgatagatgtaatactattaaaaactgaaaatac 2656
Query: 413 taaaaaaaaaccgctgaacctaataaatacagaaacaaattgaataactccaaggaaaag 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2657 taaaaaaaaaccgctgaacctaataaatacagaaacaaattgaataactccaaggaaaag 2716
Query: 473 aagaatctaacaaaccgataatgctatattatatatatwatgccaaaatcttcaacacat 532
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2717 aagaatctaacaaaccgataatgctatattatatatataatgccaaaatcttcaacacat 2776
Query: 533 ttagccagtattaattaaaaaactaaaaattacat 567
|||||||||||||||||||||||||||||||||||
Sbjct: 2777 ttagccagtattaattaaaaaactaaaaattacat 2811
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5810
Number of Sequences: 1807
Number of extensions: 5810
Number of successful extensions: 191
Number of sequences better than 1.0e-20: 1
length of query: 567
length of database: 10,358,551
effective HSP length: 16
effective length of query: 551
effective length of database: 10,329,639
effective search space: 5691631089
effective search space used: 5691631089
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)